ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1M9W9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F1M9W9_F1_nD4

F1M9W9_F1_nD4

UID: 003779708

AlphaFold

Range: 681-735,906-960,1006-1075,1186-1205
AlphaFold: AF-F1M9W9
UniProt: F1M9W9 (all domains)
Gene: Trappc8

Protein: Trafficking protein particle complex subunit 8

3D Structure

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Related Domains

Browse other domains in Ig_TPPC8_2nd →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIg_TPPC8_2nd(11.1.1.818)

Pfam Families

PF24544Ig_TPPC8_2nd

TPPC8 second Ig-like domain

ClanCL0159E-set

External Links

AlphaFold DB: F1M9W9 UniProt: F1M9W9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 681-735,906-960,1006-1075,1186-1205