ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D4A9B2_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/D4A9B2_F1_nD7

D4A9B2_F1_nD7

UID: 003780556

AlphaFold

Range: 1126-1280,1306-1375
AlphaFold: AF-D4A9B2
UniProt: D4A9B2 (all domains)
Gene: Shprh

Protein: E3 ubiquitin-protein ligase SHPRH (EC 2.3.2.27) (RING-type E3 ubiquitin transferase SHPRH) (SNF2, histone-linker, PHD and RING finger domain-containing helicase)

3D Structure

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Related Domains

Browse other domains in SHPRH_helical-2nd →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSpectrin repeat-like(604)

HH-groupE3 ubiquitin-protein ligase SHPRH second helical domain(604.28)

TT-groupE3 ubiquitin-protein ligase SHPRH second helical domain(604.28.1)

FFamilySHPRH_helical-2nd(604.28.1.1)

Pfam Families

PF21324SHPRH_helical-2nd

E3 ubiquitin-protein ligase SHPRH, second helical domain

External Links

AlphaFold DB: D4A9B2 UniProt: D4A9B2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1126-1280,1306-1375