ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

E9PU03_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/E9PU03_F1_nD2

E9PU03_F1_nD2

UID: 003780621

AlphaFold

Range: 856-1015
AlphaFold: AF-E9PU03
UniProt: E9PU03 (all domains)
Gene: Smg5

Protein: Nonsense-mediated mRNA decay factor

3D Structure

Loading viewer...

Related Domains

Browse other domains in PIN_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN_4(2006.1.4.10)

Pfam Families

PIN domain

ClanCL0280PIN

External Links

AlphaFold DB: E9PU03 UniProt: E9PU03

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 856-1015