ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9JIL8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9JIL8_F1_nD2

Q9JIL8_F1_nD2

UID: 003780641

AlphaFold

Range: 1-260,1056-1305
AlphaFold: AF-Q9JIL8
UniProt: Q9JIL8 (all domains)
Gene: Rad50

Protein: DNA repair protein RAD50 (EC 3.6.-.-)

3D Structure

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Related Domains

Browse other domains in AAA_21, AAA_23, SbcC_Walker_B →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_21, AAA_23, SbcC_Walker_B(2004.1.1.674)

Pfam Families

AAA domain, putative AbiEii toxin, Type IV TA system

ClanCL0023P-loop_NTPase

AAA domain

ClanCL0023P-loop_NTPase

PF13558SbcC_Walker_B

SbcC/RAD50-like, Walker B motif

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q9JIL8 UniProt: Q9JIL8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-260,1056-1305