ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5AMM4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5AMM4_F1_nD1

Q5AMM4_F1_nD1

UID: 003781107

AlphaFold

Range: 26-65
AlphaFold: AF-Q5AMM4
UniProt: Q5AMM4 (all domains)
Gene: DEF1

Protein: RNA polymerase II degradation factor 1

3D Structure

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Related Domains

Browse other domains in CUE →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyCUE(103.1.1.2)

Pfam Families

CUE domain

ClanCL0214UBA

External Links

AlphaFold DB: Q5AMM4 UniProt: Q5AMM4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-65