ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5A246_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5A246_F1_nD1

Q5A246_F1_nD1

UID: 003781172

AlphaFold

Range: 1-240,426-590
AlphaFold: AF-Q5A246
UniProt: Q5A246 (all domains)
Gene: RPC82

Protein: DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III subunit C3)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpc82, HTH_9, POLR3C_WHD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRNA_pol_Rpc82, HTH_9, POLR3C_WHD(101.1.2.517)

Pfam Families

PF05645RNA_pol_Rpc82

RNA polymerase III subunit RPC82

ClanCL0123HTH

RNA polymerase III subunit RPC82 helix-turn-helix domain

ClanCL0123HTH

PF22536WHD_POLR3C

POLR3C, C-terminal winged-helix domain

ClanCL0123HTH

External Links

AlphaFold DB: Q5A246 UniProt: Q5A246

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-240,426-590