ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D8PI28_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PI28_F1_nD5

A0A1D8PI28_F1_nD5

UID: 003781216

AlphaFold

Range: 541-680
AlphaFold: AF-A0A1D8PI28
UniProt: A0A1D8PI28 (all domains)
Gene: ORF298

Protein: Uncharacterized protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in RT_RNaseH →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRT_RNaseH(2484.1.1.212)

Pfam Families

PF17917RT_RNaseH

RNase H-like domain found in reverse transcriptase

ClanCL0219RNase_H

External Links

AlphaFold DB: A0A1D8PI28 UniProt: A0A1D8PI28

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 541-680