ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D8PJN1_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PJN1_F1_nD4

A0A1D8PJN1_F1_nD4

UID: 003781457

AlphaFold

Range: 856-930
AlphaFold: AF-A0A1D8PJN1
UniProt: A0A1D8PJN1 (all domains)
Gene: CAALFM_C303260WA

Protein: Cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit)

3D Structure

Loading viewer...

Related Domains

Browse other domains in CPSF100_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupIntegrator IntS9/IntS11 C-terminal domain(331.23)

TT-groupIntegrator IntS9/IntS11 C-terminal domain(331.23.1)

FFamilyCPSF100_C(331.23.1.4)

Pfam Families

PF13299CPSF100_C

Cleavage and polyadenylation factor 2 C-terminal

External Links

AlphaFold DB: A0A1D8PJN1 UniProt: A0A1D8PJN1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 856-930