ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P43075_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P43075_F1_nD3

P43075_F1_nD3

UID: 003781538

RepresentativeAlphaFold

Range: 401-630
AlphaFold: AF-P43075
UniProt: P43075 (all domains)
Gene: LIG1

Protein: tRNA ligase (EC 6.5.1.3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_lig_kinase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilytRNA_lig_kinase(2004.1.1.284)

Pfam Families

PF08303tRNA_lig_kinase

tRNA ligase kinase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: P43075 UniProt: P43075

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 401-630