ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PPU8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PPU8_F1_nD1

A0A1D8PPU8_F1_nD1

UID: 003783129

AlphaFold

Range: 146-340
AlphaFold: AF-A0A1D8PPU8
UniProt: A0A1D8PPU8 (all domains)
Gene: CAALFM_C602290CA

Protein: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase (EC 4.1.3.44) (tRNA wybutosine-synthesizing protein 1)

3D Structure

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Related Domains

Browse other domains in Flavodoxin_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupFlavoproteins/Phosphotyrosine protein phosphatases-like(2007.2)

TT-groupFlavoproteins(2007.2.1)

FFamilyFlavodoxin_1(2007.2.1.1)

Pfam Families

PF00258Flavodoxin_1

Flavodoxin

ClanCL0042Flavoprotein

External Links

AlphaFold DB: A0A1D8PPU8 UniProt: A0A1D8PPU8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 146-340