ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PUB1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PUB1_F1_nD1

A0A1D8PUB1_F1_nD1

UID: 003783362

AlphaFold

Range: 1-635
AlphaFold: AF-A0A1D8PUB1
UniProt: A0A1D8PUB1 (all domains)
Gene: HMI1

Protein: DNA 3'-5' helicase (EC 5.6.2.4)

3D Structure

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Related Domains

Browse other domains in UvrD-helicase, UvrD_C, UvrD_C_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyUvrD-helicase, UvrD_C, UvrD_C_2(2004.1.1.455)

Pfam Families

PF00580UvrD-helicase

UvrD/REP helicase N-terminal domain

ClanCL0023P-loop_NTPase

UvrD-like helicase C-terminal domain

ClanCL0023P-loop_NTPase

PF13538UvrD_C_2

UvrD-like helicase C-terminal domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0A1D8PUB1 UniProt: A0A1D8PUB1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-635