ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q5AA01_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5AA01_F1_nD1

Q5AA01_F1_nD1

UID: 003783432

AlphaFold

Range: 16-120
AlphaFold: AF-Q5AA01
UniProt: Q5AA01 (all domains)
Gene: RIM1

Protein: Single-stranded DNA-binding protein

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilySSB(2.1.1.6)

Pfam Families

Single-strand binding protein family

ClanCL0021OB

External Links

AlphaFold DB: Q5AA01 UniProt: Q5AA01

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-120