ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PPE5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PPE5_F1_nD2

A0A1D8PPE5_F1_nD2

UID: 003783995

AlphaFold

Range: 11-20,291-385,521-660
AlphaFold: AF-A0A1D8PPE5
UniProt: A0A1D8PPE5 (all domains)
Gene: CAALFM_C600560WA

Protein: Nucleoporin NDC1

3D Structure

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Related Domains

Browse other domains in Ndc1_Nup →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyNdc1_Nup(109.4.1.504)

Pfam Families

PF09531Ndc1_Nup

Nucleoporin protein Ndc1-Nup

External Links

AlphaFold DB: A0A1D8PPE5 UniProt: A0A1D8PPE5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-20,291-385,521-660