ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D8PGY1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PGY1_F1_nD2

A0A1D8PGY1_F1_nD2

UID: 003784169

AlphaFold

Range: 286-385
AlphaFold: AF-A0A1D8PGY1
UniProt: A0A1D8PGY1 (all domains)
Gene: CAALFM_C203830WA

Protein: Diphthine--ammonia ligase (EC 6.3.1.14) (Diphthamide synthase) (Diphthamide synthetase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribonuc_L-PSP →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupYjgF-like(301.7)

TT-groupYjgF-like(301.7.1)

FFamilyRibonuc_L-PSP(301.7.1.1)

Pfam Families

PF01042Ribonuc_L-PSP

Endoribonuclease L-PSP

ClanCL0534YjgF-like

External Links

AlphaFold DB: A0A1D8PGY1 UniProt: A0A1D8PGY1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-385