ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5AB78_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5AB78_F1_nD2

Q5AB78_F1_nD2

UID: 003784637

AlphaFold

Range: 56-699
AlphaFold: AF-Q5AB78
UniProt: Q5AB78 (all domains)
Gene: VPS53

Protein: Vps53p

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vps53_N, VPS53_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps53_N, VPS53_C(109.4.1.1317)

Pfam Families

PF04100Vps53_N

Vps53, N-terminal

ClanCL0020TPR

PF16854VPS53_C

Vacuolar protein sorting-associated protein 53 C-terminus

ClanCL0020TPR

External Links

AlphaFold DB: Q5AB78 UniProt: Q5AB78

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-699