ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5AMG5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5AMG5_F1_nD3

Q5AMG5_F1_nD3

UID: 003785507

AlphaFold

Range: 286-400,541-710
AlphaFold: AF-Q5AMG5
UniProt: Q5AMG5 (all domains)
Gene: RAT1

Protein: 5'-3' exoribonuclease 2 (EC 3.1.13.-)

3D Structure

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Related Domains

Browse other domains in XRN_M →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHelical domain in 5'->3' exoribonucleases(3279)

HH-groupHelical domain in 5'->3' exoribonucleases(3279.1)

TT-groupHelical domain in 5'->3' exoribonucleases(3279.1.1)

FFamilyXRN_M(3279.1.1.1)

Pfam Families

Xrn1 helical domain

External Links

AlphaFold DB: Q5AMG5 UniProt: Q5AMG5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-400,541-710