ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PGR5_F1_nD14 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PGR5_F1_nD14

A0A1D8PGR5_F1_nD14

UID: 003785799

AlphaFold

Range: 1396-1410,1441-1720
AlphaFold: AF-A0A1D8PGR5
UniProt: A0A1D8PGR5 (all domains)
Gene: CAALFM_C202540WA

Protein: rRNA biogenesis protein RRP5 (Ribosomal RNA-processing protein 5)

3D Structure

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Related Domains

Browse other domains in HAT_PRP39_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT_PRP39_N(109.4.1.1136)

Pfam Families

PF23240HAT_PRP39_N

PRP39 N-terminal HAT repeat

ClanCL0020TPR

External Links

AlphaFold DB: A0A1D8PGR5 UniProt: A0A1D8PGR5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1396-1410,1441-1720