ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D8PGR5_F1_nD8 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PGR5_F1_nD8

A0A1D8PGR5_F1_nD8

UID: 003785824

AlphaFold

Range: 761-840
AlphaFold: AF-A0A1D8PGR5
UniProt: A0A1D8PGR5 (all domains)
Gene: CAALFM_C202540WA

Protein: rRNA biogenesis protein RRP5 (Ribosomal RNA-processing protein 5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyS1(2.1.1.7)

Pfam Families

S1 RNA binding domain

ClanCL0021OB

External Links

AlphaFold DB: A0A1D8PGR5 UniProt: A0A1D8PGR5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 761-840