ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5A3P1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5A3P1_F1_nD2

Q5A3P1_F1_nD2

UID: 003785984

AlphaFold

Range: 246-330,386-405
AlphaFold: AF-Q5A3P1
UniProt: Q5A3P1 (all domains)
Gene: CAALFM_C112350WA

Protein: Ribosomal RNA-processing protein 44

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rrp44_CSD1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRrp44_CSD1(2.1.1.82)

Pfam Families

PF17216Rrp44_CSD1

Rrp44-like cold shock domain

ClanCL0021OB

External Links

AlphaFold DB: Q5A3P1 UniProt: Q5A3P1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-330,386-405