ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PPI2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PPI2_F1_nD1

A0A1D8PPI2_F1_nD1

UID: 003786398

AlphaFold

Range: 171-260
AlphaFold: AF-A0A1D8PPI2
UniProt: A0A1D8PPI2 (all domains)
Gene: TOP1

Protein: DNA topoisomerase I (EC 5.6.2.1) (DNA topoisomerase 1)

3D Structure

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Related Domains

Browse other domains in Topoisom_I_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupAlpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4057)

HH-groupAlpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4057.1)

TT-groupAlpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4057.1.1)

FFamilyTopoisom_I_N(4057.1.1.1)

Pfam Families

PF02919Topoisom_I_N

Eukaryotic DNA topoisomerase I, DNA binding fragment

External Links

AlphaFold DB: A0A1D8PPI2 UniProt: A0A1D8PPI2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 171-260