ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D8PHX2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PHX2_F1_nD2

A0A1D8PHX2_F1_nD2

UID: 003787177

AlphaFold

Range: 186-285
AlphaFold: AF-A0A1D8PHX2
UniProt: A0A1D8PHX2 (all domains)
Gene: RCL1

Protein: rRNA-processing endoribonuclease

3D Structure

Loading viewer...

Related Domains

Browse other domains in RTC_insert →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupRNA 3'-terminal phosphate cyclase, RPTC, insert domain(2485.2)

TT-groupRNA 3'-terminal phosphate cyclase, RPTC, insert domain(2485.2.1)

FFamilyRTC_insert(2485.2.1.1)

Pfam Families

PF05189RTC_insert

RNA 3'-terminal phosphate cyclase (RTC), insert domain

External Links

AlphaFold DB: A0A1D8PHX2 UniProt: A0A1D8PHX2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-285