ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5AGF9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5AGF9_F1_nD1

Q5AGF9_F1_nD1

UID: 003787756

AlphaFold

Range: 1-80,106-183
AlphaFold: AF-Q5AGF9
UniProt: Q5AGF9 (all domains)
Gene: CAALFM_C502140CA

Protein: Pyridoxal 5'-phosphate synthase

3D Structure

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Related Domains

Browse other domains in Putative_PNPOx →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPutative_PNPOx(1.1.5.8)

Pfam Families

PF01243PNPOx_N

Pyridoxamine 5'-phosphate oxidase

ClanCL0336FMN-binding

External Links

AlphaFold DB: Q5AGF9 UniProt: Q5AGF9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-80,106-183