ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PCA4_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PCA4_F1_nD7

A0A1D8PCA4_F1_nD7

UID: 003787823

AlphaFold

Range: 896-915,1111-1185,1276-1300
AlphaFold: AF-A0A1D8PCA4
UniProt: A0A1D8PCA4 (all domains)
Gene: RPO41

Protein: DNA-directed RNA polymerase (EC 2.7.7.6)

3D Structure

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Related Domains

Browse other domains in RNA_pol →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRNA_pol(304.48.1.11)

Pfam Families

PF00940RNA_pol

DNA-dependent RNA polymerase

External Links

AlphaFold DB: A0A1D8PCA4 UniProt: A0A1D8PCA4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 896-915,1111-1185,1276-1300