ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PJN1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PJN1_F1_nD2

A0A1D8PJN1_F1_nD2

UID: 003787845

AlphaFold

Range: 216-420,606-655
AlphaFold: AF-A0A1D8PJN1
UniProt: A0A1D8PJN1 (all domains)
Gene: CAALFM_C303260WA

Protein: Cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit)

3D Structure

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Related Domains

Browse other domains in Beta-Casp →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyBeta-Casp(2004.1.1.176)

Pfam Families

PF10996Beta-Casp

Beta-Casp domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0A1D8PJN1 UniProt: A0A1D8PJN1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 216-420,606-655