ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D8PIB8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PIB8_F1_nD1

A0A1D8PIB8_F1_nD1

UID: 003788703

AlphaFold

Range: 1-55,91-115
AlphaFold: AF-A0A1D8PIB8
UniProt: A0A1D8PIB8 (all domains)
Gene: CAALFM_C209180WA

Protein: Ribonuclease H2 subunit B (Ribonuclease HI subunit B)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ydr279_N →

Classification

AArchitecturebeta complex topology(a.5)

XX-grouptriple barrel(59)

HH-grouptriple barrel(59.1)

TT-groupRNase H2 subunits B and C(59.1.2)

FFamilyYdr279_N(59.1.2.2)

Pfam Families

PF17745Ydr279_N

Ydr279p protein triple barrel domain

ClanCL0662Triple_barrel

External Links

AlphaFold DB: A0A1D8PIB8 UniProt: A0A1D8PIB8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-55,91-115