ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5AMG5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5AMG5_F1_nD1

Q5AMG5_F1_nD1

UID: 003788720

AlphaFold

Range: 1-285
AlphaFold: AF-Q5AMG5
UniProt: Q5AMG5 (all domains)
Gene: RAT1

Protein: 5'-3' exoribonuclease 2 (EC 3.1.13.-)

3D Structure

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Related Domains

Browse other domains in XRN_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyXRN_N(2006.1.4.5)

Pfam Families

XRN 5'-3' exonuclease N-terminus

ClanCL0280PIN

External Links

AlphaFold DB: Q5AMG5 UniProt: Q5AMG5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-285