ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PJD1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PJD1_F1_nD3

A0A1D8PJD1_F1_nD3

UID: 003788782

AlphaFold

Range: 26-285,1076-1330
AlphaFold: AF-A0A1D8PJD1
UniProt: A0A1D8PJD1 (all domains)
Gene: RAD50

Protein: DNA repair protein RAD50

3D Structure

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Related Domains

Browse other domains in AAA_23,SbcC_Walker_B →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_23,SbcC_Walker_B(2004.1.1.199)

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

PF13558SbcC_Walker_B

SbcC/RAD50-like, Walker B motif

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0A1D8PJD1 UniProt: A0A1D8PJD1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-285,1076-1330