ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D8PDC9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PDC9_F1_nD1

A0A1D8PDC9_F1_nD1

UID: 003788785

RepresentativeAlphaFold

Range: 1-430,491-530
AlphaFold: AF-A0A1D8PDC9
UniProt: A0A1D8PDC9 (all domains)
Gene: VPS16

Protein: Probable vacuolar protein sorting-associated protein 16 homolog

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vps16_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group8-bladed(5.1.5)

FFamilyVps16_N(5.1.5.18)

Pfam Families

PF04841Vps16_N

Vps16, N-terminal region

ClanCL0186Beta_propeller

External Links

AlphaFold DB: A0A1D8PDC9 UniProt: A0A1D8PDC9

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-430,491-530