ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PME5_F1_nD9 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PME5_F1_nD9

A0A1D8PME5_F1_nD9

UID: 003788910

AlphaFold

Range: 1101-1290
AlphaFold: AF-A0A1D8PME5
UniProt: A0A1D8PME5 (all domains)
Gene: CAALFM_C405740CA

Protein: DNA-binding E3 ubiquitin-protein ligase

3D Structure

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Related Domains

Browse other domains in zf-HC5HC2H_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyzf-HC5HC2H_2(376.1.3.11)

Pfam Families

PF13832zf-HC5HC2H_2

PHD-zinc-finger like domain

ClanCL0229RING

External Links

AlphaFold DB: A0A1D8PME5 UniProt: A0A1D8PME5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1101-1290