ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PID6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PID6_F1_nD3

A0A1D8PID6_F1_nD3

UID: 003789041

AlphaFold

Range: 141-305
AlphaFold: AF-A0A1D8PID6
UniProt: A0A1D8PID6 (all domains)
Gene: SPO11

Protein: DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2)

3D Structure

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Related Domains

Browse other domains in TOP6A-Spo11_Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyTOP6A-Spo11_Toprim(2006.1.3.11)

Pfam Families

PF21180TOP6A-Spo11_Toprim

Topoisomerase 6 subunit A/Spo11, Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: A0A1D8PID6 UniProt: A0A1D8PID6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 141-305