ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PDM2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PDM2_F1_nD2

A0A1D8PDM2_F1_nD2

UID: 003789148

AlphaFold

Range: 106-175,436-540,581-680,741-805
AlphaFold: AF-A0A1D8PDM2
UniProt: A0A1D8PDM2 (all domains)
Gene: CAALFM_C105750CA

Protein: Protein ECM5

3D Structure

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Related Domains

Browse other domains in JmjC →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC(10.12.1.9)

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

External Links

AlphaFold DB: A0A1D8PDM2 UniProt: A0A1D8PDM2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-175,436-540,581-680,741-805