ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5AFB1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5AFB1_F1_nD3

Q5AFB1_F1_nD3

UID: 003789370

AlphaFold

Range: 1-85,186-245,336-525
AlphaFold: AF-Q5AFB1
UniProt: Q5AFB1 (all domains)
Gene: CAALFM_C402960WA

Protein: E3 ubiquitin-protein ligase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in ARM_UBR_1_2_3 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyARM_UBR_1_2_3(109.4.1.1289)

Pfam Families

PF30856ARM_UBR_1_2_3

UBR1/2/3-like ARM repeat domain

ClanCL0020TPR

External Links

AlphaFold DB: Q5AFB1 UniProt: Q5AFB1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-85,186-245,336-525