ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PL54_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PL54_F1_nD1

A0A1D8PL54_F1_nD1

UID: 003789406

AlphaFold

Range: 6-595,626-725,766-815,886-1070
AlphaFold: AF-A0A1D8PL54
UniProt: A0A1D8PL54 (all domains)
Gene: YPP1

Protein: Cargo-transport protein YPP1

3D Structure

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Related Domains

Browse other domains in YPP1_middle →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyYPP1_middle(109.4.1.2072)

Pfam Families

PF29151YPP1_middle

YPP1 middle domain

ClanCL0020TPR

External Links

AlphaFold DB: A0A1D8PL54 UniProt: A0A1D8PL54

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-595,626-725,766-815,886-1070