ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1P6C4F9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1P6C4F9_F1_nD2

A0A1P6C4F9_F1_nD2

UID: 003789901

AlphaFold

Range: 226-280
AlphaFold: AF-A0A1P6C4F9
UniProt: A0A1P6C4F9 (all domains)
Gene: Bm5396

Protein: Bm5396, isoform c (SMB domain-containing protein)

3D Structure

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Related Domains

Browse other domains in TSP1_spondin →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTSP-1 type 1 repeat(922)

HH-groupTSP-1 type 1 repeat(922.1)

TT-groupTSP-1 type 1 repeat(922.1.1)

FFamilyTSP1_spondin(922.1.1.5)

Pfam Families

PF19028TSP1_spondin

Spondin-like TSP1 domain

ClanCL0692TSP1

External Links

AlphaFold DB: A0A1P6C4F9 UniProt: A0A1P6C4F9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 226-280