ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0J9Y2X0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0J9Y2X0_F1_nD1

A0A0J9Y2X0_F1_nD1

UID: 003790313

AlphaFold

Range: 126-240
AlphaFold: AF-A0A0J9Y2X0
UniProt: A0A0J9Y2X0 (all domains)
Gene: bma-mdt-15

Protein: BMA-MDT-15, isoform b (Mediator of RNA polymerase II transcription subunit 15)

3D Structure

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Related Domains

Browse other domains in Med15_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyMed15_C(216.1.1.17)

Pfam Families

PF21539Med15_C

ARC105/Med15 mediator subunit C-terminal domain

ClanCL0208UBC

External Links

AlphaFold DB: A0A0J9Y2X0 UniProt: A0A0J9Y2X0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 126-240