ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0H5S2Y0_F1_nD11 - ECOD Domain | ECOD

ECOD/Domains/A0A0H5S2Y0_F1_nD11

A0A0H5S2Y0_F1_nD11

UID: 003790921

AlphaFold

Range: 1736-1840
AlphaFold: AF-A0A0H5S2Y0
UniProt: A0A0H5S2Y0 (all domains)
Gene: Bma-snrp-200

Protein: U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)

3D Structure

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Related Domains

Browse other domains in SNRNP200_wHTH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilySNRNP200_wHTH(101.1.2.392)

Pfam Families

PF23445WHD_SNRNP200

Winged Helix-turn-helix domain

ClanCL0123HTH

External Links

AlphaFold DB: A0A0H5S2Y0 UniProt: A0A0H5S2Y0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1736-1840