ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0K0JP33_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0K0JP33_F1_nD2

A0A0K0JP33_F1_nD2

UID: 003791587

AlphaFold

Range: 206-445
AlphaFold: AF-A0A0K0JP33
UniProt: A0A0K0JP33 (all domains)
Gene: Bm1_24910

Protein: tRNA pseudouridine(55) synthase (EC 5.4.99.25) (tRNA pseudouridine 55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pus10_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyPus10_C(304.102.1.7)

Pfam Families

PF21238Pus10_C

Pus10, C-terminal

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: A0A0K0JP33 UniProt: A0A0K0JP33

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 206-445