ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0J9XNQ7_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0J9XNQ7_F1_nD1

A0A0J9XNQ7_F1_nD1

UID: 003792272

AlphaFold

Range: 1-195
AlphaFold: AF-A0A0J9XNQ7
UniProt: A0A0J9XNQ7 (all domains)
Gene: bma-mdt-20

Protein: Mediator of RNA polymerase II transcription subunit 20 (Mediator complex subunit 20)

3D Structure

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Related Domains

Browse other domains in Med20 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupmRNA triphosphatase CET1-related(868)

HH-groupmRNA triphosphatase CET1-related(868.1)

TT-groupmRNA triphosphatase CET1-related(868.1.1)

FFamilyMed20(868.1.1.3)

Pfam Families

TATA-binding related factor (TRF) of subunit 20 of Mediator complex

ClanCL0273CYTH

External Links

AlphaFold DB: A0A0J9XNQ7 UniProt: A0A0J9XNQ7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-195