ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0J9Y654_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A0J9Y654_F1_nD4

A0A0J9Y654_F1_nD4

UID: 003793403

AlphaFold

Range: 761-830
AlphaFold: AF-A0A0J9Y654
UniProt: A0A0J9Y654 (all domains)
Gene: bma-cpsf-2

Protein: Cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit)

3D Structure

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Related Domains

Browse other domains in CPSF100_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupIntegrator IntS9/IntS11 C-terminal domain(331.23)

TT-groupIntegrator IntS9/IntS11 C-terminal domain(331.23.1)

FFamilyCPSF100_C(331.23.1.4)

Pfam Families

PF13299CPSF100_C

Cleavage and polyadenylation factor 2 C-terminal

External Links

AlphaFold DB: A0A0J9Y654 UniProt: A0A0J9Y654

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 761-830