ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0J9XW60_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A0J9XW60_F1_nD4

A0A0J9XW60_F1_nD4

UID: 003794033

AlphaFold

Range: 521-740
AlphaFold: AF-A0A0J9XW60
UniProt: A0A0J9XW60 (all domains)
Gene: bma-xpb-1

Protein: General transcription and DNA repair factor IIH helicase/translocase subunit XPB (EC 5.6.2.4) (DNA 3'-5' helicase/translocase XPB)

3D Structure

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Related Domains

Browse other domains in Helicase_C, ERCC3_RAD25_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHelicase_C, ERCC3_RAD25_C(2004.1.1.457)

Pfam Families

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

PF16203ERCC3_RAD25_C

ERCC3/RAD25/XPB C-terminal helicase

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0A0J9XW60 UniProt: A0A0J9XW60

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 521-740