ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2knvB1 - ECOD Domain | ECOD

ECOD/Domains/e2knvB1

e2knvB1

UID: 000379613

PDB

Range: B:1-52
PDB: 2KNV chain B(all domains)
UniProt: Q13501 (all domains)
Gene: SQSTM1

Molecule: Sequestosome-1 (EBI3-associated protein of 60 kDa) (EBIAP) (p60) (Phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa) (Ubiquitin-binding protein p62) (p62)

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyUBA_5(103.1.1.15)

Pfam Families

UBA domain

ClanCL0214UBA

External Links

ECOD PDB View: 2KNV RCSB PDB: 2KNV PDBe: 2KNV UniProt: Q13501

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