ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5S6PFA5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A5S6PFA5_F1_nD3

A0A5S6PFA5_F1_nD3

UID: 003798665

AlphaFold

Range: 431-770
AlphaFold: AF-A0A5S6PFA5
UniProt: A0A5S6PFA5 (all domains)
Gene: Bm1_38570

Protein: Vacuolar protein sorting-associated protein 16 homolog

3D Structure

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Related Domains

Browse other domains in Vps16_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps16_C(109.4.1.72)

Pfam Families

PF04840Vps16_C

Vps16, C-terminal region

ClanCL0020TPR

External Links

AlphaFold DB: A0A5S6PFA5 UniProt: A0A5S6PFA5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 431-770