ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0H5SMD2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0H5SMD2_F1_nD2

A0A0H5SMD2_F1_nD2

UID: 003800793

AlphaFold

Range: 1-15,41-125,151-175,241-250,296-330,356-590
AlphaFold: AF-A0A0H5SMD2
UniProt: A0A0H5SMD2 (all domains)
Gene: Bma-trpp-8

Protein: Bm4158 (Trafficking protein particle complex subunit 8)

3D Structure

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Related Domains

Browse other domains in TRAPPC-Trs85 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTRAPPC-Trs85(109.4.1.339)

Pfam Families

PF12739TRAPPC-Trs85

ER-Golgi trafficking TRAPP I complex 85 kDa subunit

External Links

AlphaFold DB: A0A0H5SMD2 UniProt: A0A0H5SMD2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-15,41-125,151-175,241-250,296-330,356-590