ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4IYF8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F4IYF8_F1_nD4

F4IYF8_F1_nD4

UID: 003803244

AlphaFold

Range: 786-883
AlphaFold: AF-F4IYF8
UniProt: F4IYF8 (all domains)
Gene: At3g02760

Protein: Histidine--tRNA ligase, cytoplasmic (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)

3D Structure

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Related Domains

Browse other domains in HGTP_anticodon →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupAnticodon-binding domain of Class II aaRS(7502)

HH-groupAnticodon-binding domain of Class II aaRS(7502.1)

TT-groupAnticodon-binding domain of Class II aaRS(7502.1.1)

FFamilyHGTP_anticodon(7502.1.1.1)

Pfam Families

PF03129HGTP_anticodon

Anticodon binding domain

ClanCL0458IIaaRS-ABD

External Links

AlphaFold DB: F4IYF8 UniProt: F4IYF8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 786-883