ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9SJH8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9SJH8_F1_nD1

Q9SJH8_F1_nD1

UID: 003803313

AlphaFold

Range: 16-135
AlphaFold: AF-Q9SJH8
UniProt: Q9SJH8 (all domains)
Gene: At2g42780

Protein: At2g42780/F7D19.22 (Expressed protein) (Transcription elongation factor B polypeptide)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Elongin_A →

Classification

AArchitecturealpha arrays(a.6)

XX-groupF-box domain(145)

HH-groupF-box domain(145.1)

TT-groupF-box domain(145.1.1)

FFamilyElongin_A(145.1.1.2)

Pfam Families

PF06881Elongin_A

RNA polymerase II transcription factor SIII (Elongin) subunit A

ClanCL0271F-box

External Links

AlphaFold DB: Q9SJH8 UniProt: Q9SJH8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-135