ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4IGA5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4IGA5_F1_nD2

F4IGA5_F1_nD2

UID: 003803329

AlphaFold

Range: 566-1125
AlphaFold: AF-F4IGA5
UniProt: F4IGA5 (all domains)
Gene: NUP133

Protein: Nuclear pore complex protein NUP133 (Nucleoporin 133) (Nucleoporin Nup155-like)

3D Structure

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Related Domains

Browse other domains in Nucleoporin_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26)

TT-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26.1)

FFamilyNucleoporin_C(109.26.1.1)

Pfam Families

PF03177Nucleoporin_C

Non-repetitive/WGA-negative nucleoporin C-terminal

ClanCL0020TPR

External Links

AlphaFold DB: F4IGA5 UniProt: F4IGA5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 566-1125