ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q84W43_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q84W43_F1_nD2

Q84W43_F1_nD2

UID: 003803491

AlphaFold

Range: 41-60,106-500
AlphaFold: AF-Q84W43
UniProt: Q84W43 (all domains)
Gene: At5g12960

Protein: Proline-tRNA ligase (DUF1680)

3D Structure

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Related Domains

Browse other domains in Beta-AFase-like_GH127_cat →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyBeta-AFase-like_GH127_cat(109.2.1.25)

Pfam Families

PF07944Beta-AFase-like_GH127_cat

Beta-L-arabinofuranosidase, GH127 catalytic domain

ClanCL00596_Hairpin

External Links

AlphaFold DB: Q84W43 UniProt: Q84W43

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-60,106-500