ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9S775_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9S775_F1_nD5

Q9S775_F1_nD5

UID: 003803758

AlphaFold

Range: 516-750,771-820
AlphaFold: AF-Q9S775
UniProt: Q9S775 (all domains)
Gene: PKL

Protein: CHD3-type chromatin-remodeling factor PICKLE (EC 3.6.4.-) (Protein CHROMATIN REMODELING 6) (AtCHR6) (Protein GYMNOS)

3D Structure

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Related Domains

Browse other domains in SNF2-rel_dom, Helicase_C, HDA2-3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySNF2-rel_dom, Helicase_C, HDA2-3(2004.1.1.428)

Pfam Families

PF00176SNF2-rel_dom

SNF2-related domain

ClanCL0023P-loop_NTPase

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

Class II histone deacetylase complex subunits 2 and 3

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q9S775 UniProt: Q9S775

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 516-750,771-820