ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A8MRG8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A8MRG8_F1_nD1

A8MRG8_F1_nD1

UID: 003804030

AlphaFold

Range: 11-85
AlphaFold: AF-A8MRG8
UniProt: A8MRG8 (all domains)
Gene: At4g20325

Protein: Ribonuclease H2 subunit B (Ribonuclease HI subunit B)

3D Structure

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Related Domains

Browse other domains in Ydr279_N →

Classification

AArchitecturebeta complex topology(a.5)

XX-grouptriple barrel(59)

HH-grouptriple barrel(59.1)

TT-groupRNase H2 subunits B and C(59.1.2)

FFamilyYdr279_N(59.1.2.2)

Pfam Families

PF17745Ydr279_N

Ydr279p protein triple barrel domain

ClanCL0662Triple_barrel

External Links

AlphaFold DB: A8MRG8 UniProt: A8MRG8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-85