ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1P8BD97_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1P8BD97_F1_nD1

A0A1P8BD97_F1_nD1

UID: 003804846

AlphaFold

Range: 206-225,356-425
AlphaFold: AF-A0A1P8BD97
UniProt: A0A1P8BD97 (all domains)
Gene: At5g25520

Protein: SPOC domain / Transcription elongation factor S-II protein

3D Structure

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Related Domains

Browse other domains in TFIIS_M →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupElongation factor TFIIS domain 2/ Kix domain of creb binding protein(103.4)

TT-groupElongation factor TFIIS domain 2/ Kix domain of creb binding protein(103.4.1)

FFamilyTFIIS_M(103.4.1.2)

Pfam Families

PF07500TFIIS_M

Transcription factor S-II (TFIIS), central domain

External Links

AlphaFold DB: A0A1P8BD97 UniProt: A0A1P8BD97

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 206-225,356-425